plotSummaryStats: Plot summary statistics for a GInteractions object
Description
Makes summary plots of the counts, interaction distances, interaction
annotations, and percentage of cis and trans interactions for a
GInteractions object using `plotCounts`, `plotDists`, `plotCisTrans`,
and `plotInteractionAnnotations`.
Usage
plotSummaryStats(GIObject, other = 5, cut = 10)
Arguments
GIObject
A GInteractions object
other
Default 5. Passed to plotInteractionAnnotations. Interaction types making up fewer than "other" percent of the total interactions will be consolidated into a single "other" category.
cut
Default 10. Passed to plotCounts.All interactions with counts > cut are consolidated into a single category.