makeSummarizedExperimentFromExpressionSet

WARNING: The SummarizedExperiment class is deprecated and being
 replaced with the <a rd-options="SummarizedExperiment" href="/link/RangedSummarizedExperiment?package=GenomicRanges&version=1.22.0&to=SummarizedExperiment" data-mini-rdoc="SummarizedExperiment::RangedSummarizedExperiment">RangedSummarizedExperiment</a>
 class defined in the new SummarizedExperiment package. Please make sure to install and load the SummarizedExperiment package
 where the <code>makeSummarizedExperimentFromExpressionSet</code> function is now
 defined and documented. Note that the function now returns a
 <a rd-options="SummarizedExperiment" href="/link/RangedSummarizedExperiment?package=GenomicRanges&version=1.22.0&to=SummarizedExperiment" data-mini-rdoc="SummarizedExperiment::RangedSummarizedExperiment">RangedSummarizedExperiment</a> instance instead
 of a <a rd-options="" href="/link/SummarizedExperiment?package=GenomicRanges&version=1.22.0" data-mini-rdoc="GenomicRanges::SummarizedExperiment">SummarizedExperiment</a> instance.

The ability to efficiently represent and manipulate genomic
annotations and alignments is playing a central role when it comes
to analyzing high-throughput sequencing data (a.k.a. NGS data).
The GenomicRanges package defines general purpose containers for
storing and manipulating genomic intervals and variables defined along
a genome. More specialized containers for representing and manipulating
short alignments against a reference genome, or a matrix-like
summarization of an experiment, are defined in the GenomicAlignments
and SummarizedExperiment packages respectively. Both packages build
on top of the GenomicRanges infrastructure.

Bioconductor Package Maintainer

GenomicRanges

Representation and manipulation of genomic intervals and variables defined along a genome

makeSummarizedExperimentFromExpressionSet function

WARNING: The SummarizedExperiment class is deprecated and being
 replaced with the <a rd-options='SummarizedExperiment' href='RangedSummarizedExperiment'>RangedSummarizedExperiment</a>
 class defined in the new SummarizedExperiment package.

 Please make sure to install and load the SummarizedExperiment package
 where the <code>makeSummarizedExperimentFromExpressionSet</code> function is now
 defined and documented. Note that the function now returns a
 <a rd-options='SummarizedExperiment' href='RangedSummarizedExperiment'>RangedSummarizedExperiment</a> instance instead
 of a <a rd-options='' href='SummarizedExperiment'>SummarizedExperiment</a> instance.

makeSummarizedExperimentFromExpressionSet: Make a SummarizedExperiment object from an ExpressionSet

Description

Arguments