class:DelegatingGenomicRanges

DelegatingGenomicRanges-class

seqnames,DelegatingGenomicRanges-method

ranges,DelegatingGenomicRanges-method

strand,DelegatingGenomicRanges-method

seqinfo,DelegatingGenomicRanges-method


  The <code>DelegatingGenomicRanges</code> class implements the virtual
  <code>GenomicRanges</code> class using a delegate <code>GenomicRanges</code>. This
  enables developers to create <code>GenomicRanges</code> subclasses that add
  specialized columns or other structure, while remaining agnostic to
  how the data are actually stored. See the Extending GenomicRanges
  vignette.


The ability to efficiently represent and manipulate genomic
annotations and alignments is playing a central role when it comes
to analyzing high-throughput sequencing data (a.k.a. NGS data).
The GenomicRanges package defines general purpose containers for
storing and manipulating genomic intervals and variables defined along
a genome. More specialized containers for representing and manipulating
short alignments against a reference genome, or a matrix-like
summarization of an experiment, are defined in the GenomicAlignments
and SummarizedExperiment packages respectively. Both packages build
on top of the GenomicRanges infrastructure.

Bioconductor Package Maintainer

GenomicRanges

Representation and manipulation of genomic intervals and variables defined along a genome

DelegatingGenomicRanges-class function

The <code>DelegatingGenomicRanges</code> class implements the virtual
  <code>GenomicRanges</code> class using a delegate <code>GenomicRanges</code>. This
  enables developers to create <code>GenomicRanges</code> subclasses that add
  specialized columns or other structure, while remaining agnostic to
  how the data are actually stored. See the Extending GenomicRanges
  vignette.

DelegatingGenomicRanges-class: DelegatingGenomicRanges objects

Description

Arguments