phicoef


    Two logical vectors of the same length.
    If <code>y</code> is not supplied, <code>x</code> must be a 2x2 integer matrix
    (or an integer vector of length 4) representing the contingency table
    of two binary variables.
  

x, y


  The <code>phicoef</code> function calculates the "phi coefficient" between
  two binary variables.


manip

The ability to efficiently represent and manipulate genomic
annotations and alignments is playing a central role when it comes
to analyzing high-throughput sequencing data (a.k.a. NGS data).
The GenomicRanges package defines general purpose containers for
storing and manipulating genomic intervals and variables defined along
a genome. More specialized containers for representing and manipulating
short alignments against a reference genome, or a matrix-like
summarization of an experiment, are defined in the GenomicAlignments
and SummarizedExperiment packages respectively. Both packages build
on top of the GenomicRanges infrastructure.

Bioconductor Package Maintainer

GenomicRanges

Representation and manipulation of genomic intervals and variables defined along a genome

phicoef function

Two logical vectors of the same length.
    If <code>y</code> is not supplied, <code>x</code> must be a 2x2 integer matrix
    (or an integer vector of length 4) representing the contingency table
    of two binary variables.

The <code>phicoef</code> function calculates the "phi coefficient" between
  two binary variables.

phicoef: Calculate the "phi coefficient" between two binary variables

Description

Usage

Arguments

Value

References

Examples