GeoGenetix (version 0.0.2)

SimTangleData: Simulation of data

Description

Simulate data under the model assumed by the MCMC inference program

Usage

SimTangleData(mod, theta, nsite, nloc, nind,nalM, nalm, var.par, scale.par)

Arguments

mod

A character string equal to "G+E", "G", "E"

theta

A vector of length 5 containing values for (alpha,beta_G,beta_E,gamma,delta)

nsite

Number of geographical locations

nloc

Number of loci

nind

Haploid population size at each combination location x locus

nalM

Maximum number of alleles over the various loci

nalm

Minimum number of alleles over the various loci

var.par

Variance of the random field model for the environmental variable

scale.par

Scale parameter in the exponential covariance of the random field model for the environmental variable

Value

distances, model and parameters.

Examples

data(toydata,package='GeoGenetix')