Merge_methy_tcga

Merge methylation data downloaded from TCGA

Gene Expression Omnibus(GEO) and The Cancer Genome Atlas (TCGA)
provide us with a wealth of data, such as RNA-seq, DNA Methylation, SNP
and Copy number variation data. It's easy to download data from TCGA using the
gdc tool, but processing these data into a format suitable for bioinformatics
analysis requires more work. This R package was developed to handle these data.

Erqiang Hu

GeoTcgaData

Processing various types of data on GEO and TCGA

Merge_methy_tcga function

<dl><dt>dirr</dt>
<dd>a string for the directory of methylation data download from tcga
useing the tools gdc</dd></dl>

Arguments

Merge methylation data downloaded from TCGA — Merge_methy_tcga

<dl>

<dt>dirr</dt>
<dd>a string for the directory of methylation data download from tcga
useing the tools gdc</dd>

</dl>

Merge_methy_tcga: Merge methylation data downloaded from TCGA

Description

Usage

Value

Arguments

Examples