GeoTcgaData (version 1.1.1.992)

diff_RNA_ucsc: Do difference analysis of RNA-seq data downloaded from ucsc

Description

Do difference analysis of RNA-seq data downloaded from ucsc

Usage

diff_RNA_ucsc(ucscfile, ...)

Arguments

ucscfile

a dataframe or numeric matrix of ucsc RNA-seq data

...

additional parameters

Examples

if (FALSE) {
ucscfile <- data.table::fread("TCGA-BRCA.htseq_counts.tsv.gz")
group <- sample(c("grp1", "grp2"), ncol(ucscfile) - 1, replace = TRUE)
result <- diff_RNA_ucsc(ucscfile, group = group)
}