profile

<p>the first column represents the gene symbol</p>

datasets

Gene Expression Omnibus(GEO) and The Cancer Genome Atlas (TCGA)
provide us with a wealth of data, such as RNA-seq, DNA Methylation, SNP
and Copy number variation data. It's easy to download data from TCGA using the
gdc tool, but processing these data into a format suitable for bioinformatics
analysis requires more work. This R package was developed to handle these data.

Erqiang Hu

GeoTcgaData

Processing various types of data on GEO and TCGA

profile function

<p>A matrix with 10 rows and 10 column</p>

profile: a matrix of gene expression data in TCGA

Description

Usage

Arguments

Format

Details