GillespieSSA2 (version 0.3.0)

plot_ssa: Simple plotting of ssa output

Description

Provides basic functionally for simple and quick time series plot of simulation output from ssa().

Usage

plot_ssa(
  ssa_out,
  state = TRUE,
  propensity = FALSE,
  buffer = FALSE,
  firings = FALSE,
  geom = c("point", "step")
)

Arguments

ssa_out

Data object returned by ssa().

state

Whether or not to plot the state values.

propensity

Whether or not to plot the propensity values.

buffer

Whether or not to plot the buffer values.

firings

Whether or not to plot the reaction firings values.

geom

Which geom to use, must be one of "point", "step".