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The Gmisc package

Tools for making:

the descriptive "Table 1" used in medical articles
transition plot for showing changes between categories
flow charts based on the grid package
a method for variable selection based on the SVD
Bézier lines with arrows complementing the ones in the 'grid' package, and more.

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Version

Install

install.packages('Gmisc')

Monthly Downloads

1,539

Version

3.0.1

License

GPL (>= 3)

Maintainer

Max Gordon

Last Published

November 19th, 2022

Functions in Gmisc (3.0.1)

Create a box with text

bezierArrowSmpl

A simple bezier arrow

Collection of functions for plotting relations, generating tables, and more.

bezierArrowGradient

A bezier arrow with gradient

calculateLinesAndArrow

Gets offsetted lines

Checks if unit or number 0-1

Gmisc-deprecated

Deprecated function(s) in Gmisc

Transition-class

A reference class for generating transition plots

Create a box with a color split

Get the distance between grid objects

describeFactors

Describes factor variables

copyAllNewAttributes

A simple thing to keep the attributes

Get statistics for missing data

Connect boxes with an arrow

A function that returns a description proportion that contains the number and the percentage

A function that returns a description median that contains the interquartile range or the full range

Describe the mean

Get the box coordinates

convertShowMissing

A function for converting a show_missing variable.

getBezierAdj4Arrw

Gets the bezier points adjusted for an arrow

getDescriptionStatsBy

Creating of description statistics

P-value extractors for getDescriptionStatsBy

Gets grid value

getAbsoluteWidth

Translates "npc" widths into absolute units

Gets the next figure caption number

Merging of multiple lists

An R alternative to the lodash has in JavaScript

getSvdMostInfluential

Gets the maximum contributor variables from svd()

Prepares a matrix for htmlTable from a list

gnrlBezierPoints

Generates a generalized Bézier line

Just a simple help with interpreting the radians

mergeLists_internal

A helper function for mergeLists that does the actual work.

Gets the last figure caption number

A wrapper around the htmlTable/latex function

Formatter wrapper for html_document, facilitates easier porting to docx

prAddTotalDescColumn

Add a total column to the results

Convert the by-list into a matrix compatible format

insertRowAndKeepAttr

Insert a row into a matrix

prBuildSubLabel

Add a sub-label to boxPropGrob

Adds a figure caption number

An alternative to the internal do.call

prConvert2Coords

Converts an object to coordinates

A path join function

Helper to [getDescriptionStatsBy()]

Fixes the caption for elements without caption

prFtpOtherRemoval

Removes other unwanted lines

prFtpOtherChanges

Changes lines for XML-conformity

prCreateBoxCoordinates

Creates coordinates for box

prFtpScriptRemoval

Removes the <script>*</scrip>

prTcPlotBoxColumn

Plots a column of boxes

prTcValidateAndPrepClr

Checks and prepares colors

prAddDescUnitColumn

Add a units column to the results

Add a p-value column to the results

prDescGetAndValidateDefaultRef

A helper function for the description stats

print.Gmisc_list_of_boxes

prPushMarginViewport

Pushes viewport with margins

prTpGetBoxPositions

Gets the box position

Updates the css max-width

Plot boxes and arrows

prTpGetBoxPropClr

Gets the color for the given box

Plots the arrows

prGetDescHeader

Retrieve basic description stats by header

Collapses a vector for throwing errors

Helper to [getDescriptionStatsBy()]

Plots the box for the transition plot

validateAndConvertVectorInputs

Checks the input of a vector

Outputs an object

prGetStatistics

Get statistics according to the type

An R alternative to the lodash get in JavaScript

set_column_units

Add [Hmisc::unit()] to multiple columns

prGetTextGrobCex

Just a simple acces to the gp$cex parameter

prGridPlotTitle

Adds a title to the plot

A dense time-span text

Helper to [getDescriptionStatsBy()]

set_column_labels

Add [Hmisc::label()] to multiple columns

prFixDescRownames

Fix rownames for descriptive results

A transition plot

prTpGetBoxSizedTextGrob

Gets the text size for the box

Gets a set of colors or just one color

prFtpHeaderStyle

Helper to ftp_document

Plots the arrows within a single transition set

Finds the matching colors for the new addition based on the original set of colors