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The Gmisc package

Tools for making:

the descriptive "Table 1" used in medical articles
transition plot for showing changes between categories
flow charts based on the grid package
a method for variable selection based on the SVD
Bézier lines with arrows complementing the ones in the 'grid' package, and more.

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Version

Install

install.packages('Gmisc')

Monthly Downloads

4,940

Version

3.0.2

License

GPL (>= 3)

Maintainer

Max Gordon

Last Published

March 13th, 2023

Functions in Gmisc (3.0.2)

Transition-class

A reference class for generating transition plots

Gmisc-deprecated

Deprecated function(s) in Gmisc

Create a box with a color split

bezierArrowGradient

A bezier arrow with gradient

Collection of functions for plotting relations, generating tables, and more.

calculateLinesAndArrow

Gets offsetted lines

Create a box with text

bezierArrowSmpl

A simple bezier arrow

Checks if unit or number 0-1

Connect boxes with an arrow

Describe the mean

Get the box coordinates

Get statistics for missing data

A function that returns a description proportion that contains the number and the percentage

convertShowMissing

A function for converting a show_missing variable.

Get the distance between grid objects

describeFactors

Describes factor variables

A function that returns a description median that contains the interquartile range or the full range

Formatter wrapper for html_document, facilitates easier porting to docx

getBezierAdj4Arrw

Gets the bezier points adjusted for an arrow

An alternative to the internal do.call

P-value extractors for getDescriptionStatsBy

copyAllNewAttributes

A simple thing to keep the attributes

Gets grid value

getDescriptionStatsBy

Creating of description statistics

Gets the next figure caption number

getAbsoluteWidth

Translates "npc" widths into absolute units

An R alternative to the lodash has in JavaScript

gnrlBezierPoints

Generates a generalized Bézier line

getSvdMostInfluential

Gets the maximum contributor variables from svd()

Adds a figure caption number

Prepares a matrix for htmlTable from a list

A wrapper around the htmlTable/latex function

A path join function

Gets the last figure caption number

insertRowAndKeepAttr

Insert a row into a matrix

Just a simple help with interpreting the radians

Add a p-value column to the results

Convert the by-list into a matrix compatible format

prAddTotalDescColumn

Add a total column to the results

prFtpHeaderStyle

Helper to ftp_document

prFixDescRownames

Fix rownames for descriptive results

prAddDescUnitColumn

Add a units column to the results

prBuildSubLabel

Add a sub-label to boxPropGrob

Merging of multiple lists

Fixes the caption for elements without caption

mergeLists_internal

A helper function for mergeLists that does the actual work.

prFtpScriptRemoval

Removes the <script>*</scrip>

prGetStatistics

Get statistics according to the type

prGetTextGrobCex

Just a simple acces to the gp$cex parameter

prConvert2Coords

Converts an object to coordinates

Finds the matching colors for the new addition based on the original set of colors

Plots the arrows within a single transition set

prTpGetBoxPositions

Gets the box position

prTpGetBoxPropClr

Gets the color for the given box

prFtpOtherChanges

Changes lines for XML-conformity

prFtpOtherRemoval

Removes other unwanted lines

prGetDescHeader

Retrieve basic description stats by header

prTcPlotBoxColumn

Plots a column of boxes

prTcValidateAndPrepClr

Checks and prepares colors

prPushMarginViewport

Pushes viewport with margins

prCreateBoxCoordinates

Creates coordinates for box

print.Gmisc_list_of_boxes

Updates the css max-width

Plot boxes and arrows

Helper to [getDescriptionStatsBy()]

prDescGetAndValidateDefaultRef

A helper function for the description stats

Collapses a vector for throwing errors

prTpGetBoxSizedTextGrob

Gets the text size for the box

Helper to [getDescriptionStatsBy()]

Gets a set of colors or just one color

A dense time-span text

Plots the arrows

A transition plot

Plots the box for the transition plot

validateAndConvertVectorInputs

Checks the input of a vector

Outputs an object

prGridPlotTitle

Adds a title to the plot

set_column_labels

Add [Hmisc::label()] to multiple columns

Helper to [getDescriptionStatsBy()]

An R alternative to the lodash get in JavaScript

set_column_units

Add [Hmisc::unit()] to multiple columns