hemisphere.points

Internal function that projects a hemisphere or spherical dome through the image stack to determine the end voxels of each possible path from a seed point.

internal

Reconstruction of muscle fibers from image stacks using textural analysis. Includes functions for tracking, smoothing, cleaning, plotting and exporting muscle fibers. Also calculates basic fiber properties (e.g., length and curvature).

J. Arbour

GoodFibes

Detection and Reconstruction of Muscle Fibers from diceCT Image
Data

Jessica Arbour

hemisphere.points function

<dl> <dt>radius</dt>
<dd>The number of images out from the seed point plane to sample</dd> <dt>show.plot</dt>
<dd>Generates a 3D plot showing the end points of possible paths</dd> <dt>backstep</dt>
<dd>Should images in the seed point plane or behind it be considered. Each value (1, 2, 3, etc.) gives the number of images "behind" the seed point to consider in the spherical dome</dd></dl>

Arguments

Author

Finding end points of possible paths — hemisphere.points

<dl>

 <dt>radius</dt>
<dd>The number of images out from the seed point plane to sample</dd>

 <dt>show.plot</dt>
<dd>Generates a 3D plot showing the end points of possible paths</dd>

 <dt>backstep</dt>
<dd>Should images in the seed point plane or behind it be considered. Each value (1, 2, 3, etc.) gives the number of images "behind" the seed point to consider in the spherical dome</dd>

</dl>

hemisphere.points: Finding end points of possible paths

Description

Usage

Value

Arguments

Author

See Also