get.whites

Used internally in good.fibes to determine grayscale values along all possible line paths

internal

Reconstruction of muscle fibers from image stacks using textural analysis. Includes functions for tracking, smoothing, cleaning, plotting and exporting muscle fibers. Also calculates basic fiber properties (e.g., length and curvature).

J. Arbour

GoodFibes

Detection and Reconstruction of Muscle Fibers from diceCT Image
Data

Jessica Arbour

get.whites function

<dl> <dt>imglist</dt>
<dd>The current images being considered</dd> <dt>lpl</dt>
<dd>generated by points.generator to find the position of all possible paths</dd> <dt>depth</dt>
<dd>radius + 1 from good.fibes</dd> <dt>backstep</dt>
<dd>How many images to consider "behind" the plane of the zero.image.</dd></dl>

Arguments

An internal function determining grayscale values — get.whites

<dl>

 <dt>imglist</dt>
<dd>The current images being considered</dd>

 <dt>lpl</dt>
<dd>generated by points.generator to find the position of all possible paths</dd>

 <dt>depth</dt>
<dd>radius + 1 from good.fibes</dd>

 <dt>backstep</dt>
<dd>How many images to consider "behind" the plane of the zero.image.</dd>

</dl>

get.whites: An internal function determining grayscale values

Description

Usage

Value

Arguments

Details