Summarize


  A list generated by <code>GraphMetagen</code>.


GraphQuant


This function is supplementary to <code>MakeGUIPlots</code>. It constructs summary of the graphical model for displaying in the GUI. Summary includes number of samples, estimated number of clusters, cluster composition of true(if provided) and estimated clusters and the misclassification error.


Represents metagenomic samples on the Euclidean space to examine similarity amongst samples by studying clusters in the model. Given the matrix of metagenomic counts for samples, this package (1) quantifies dissimilarity between samples using Kendall's tau-distance, (2) constructs multidimensional models of different dimension, and (3) plots the models for visualization and comparison.

Summarize: Display summary of the graphical model constructed.

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