metagencounts


This data comprises random metagenomic counts generated using simulation model II described in the reference below. The counts are recorded for a total of 80 samples over 200 taxa. The 80 samples are divided into eight communities of equal size.


datasets

Represents metagenomic samples on the Euclidean space to examine similarity amongst samples by studying clusters in the model. Given the matrix of metagenomic counts for samples, this package (1) quantifies dissimilarity between samples using Kendall's tau-distance, (2) constructs multidimensional models of different dimension, and (3) plots the models for visualization and comparison.

Deepak Nag Ayyala

metagencounts: Randomly generated Metagenomic Counts

Description

Usage

Arguments

Format

References