esp.freq.hap

hap.assoc

piQ.t0

timeT

provided by <code>pi.hap()</code> function, list of numeric objects.

pi.hap

provided by <code>structure.hap()</code> function, list of numeric objects.

res.structure

provided by <code>poids.D()</code> function, list of numeric objects.

poids.D


This function computes the expectation of (haplotype + Q allele) frequencies under a Wrigth-Fisher model.
The function can be viewed as an internal function. 
The user does not have to call it by himself.


models

The package provides a set of functions whose aim is to
propose 4 methods of QTL detection. HAPimLD is an
interval-mapping method designed for unrelated individuals with
no family information that makes use of linkage disequilibrium.
HAPimLDL is an interval-mapping method for design of half-sib
families. It combines linkage analysis and linkage
disequilibrium. HaploMax is based on an analysis of variance
with a dose haplotype effect. HaploMaxHS is based on an
analysis of variance with a sire effect and a dose haplotype
effect in half-sib family design.  Fundings for the package
development were provided to the LDLmapQTL project by the ANR
GENANIMAL program and APIS-GENE.

esp.freq.hap: expectation of extended haplotype frequencies

Description

Usage

Arguments

Value

References

See Also