obj.LD.add.H0

numeric vector of length = number of individuals which contains the performances of individuals.

perf

numeric vector of length=number of individuals which contains the CD of individuals.  var(perf$_i$)=s/CD$^2_i$


The function calculates the log-likelihood value of HAPimLD method under hypothesis HO.
It can be viewed as an internal function. 
The user does not have to call it by himself.


models

The package provides a set of functions whose aim is to
propose 4 methods of QTL detection. HAPimLD is an
interval-mapping method designed for unrelated individuals with
no family information that makes use of linkage disequilibrium.
HAPimLDL is an interval-mapping method for design of half-sib
families. It combines linkage analysis and linkage
disequilibrium. HaploMax is based on an analysis of variance
with a dose haplotype effect. HaploMaxHS is based on an
analysis of variance with a sire effect and a dose haplotype
effect in half-sib family design.  Fundings for the package
development were provided to the LDLmapQTL project by the ANR
GENANIMAL program and APIS-GENE.

obj.LD.add.H0: log-likelihood value of HAPimLD method under H0

Description

Usage

Arguments

Value

References