This function computes the observed frequencies of each haplotype.
The function can be viewed as an internal function.
The user does not have to call it by himself.
Usage
pi.hap.NI(res.structure, cor.hap)
Arguments
res.structure
results provided by structure.hap() function, list of objects.
cor.hap
results provided by corresp() function, list of numeric objects.
Value
The returned value is a list of numeric vectors containing haplotypes freqencies estimated on haplotypes with non missing information.
References
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert,
T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin.
Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.