# HH v3.1-30

Monthly downloads

## Statistical Analysis and Data Display: Heiberger and Holland

Support software for Statistical Analysis and Data Display (Second Edition, Springer, ISBN 978-1-4939-2121-8, 2015) and (First Edition, Springer, ISBN 0-387-40270-5, 2004) by Richard M. Heiberger and Burt Holland. This contemporary presentation of statistical methods features extensive use of graphical displays for exploring data and for displaying the analysis. The second edition includes redesigned graphics and additional chapters. The authors emphasize how to construct and interpret graphs, discuss principles of graphical design, and show how accompanying traditional tabular results are used to confirm the visual impressions derived directly from the graphs. Many of the graphical formats are novel and appear here for the first time in print. All chapters have exercises. All functions introduced in the book are in the package. R code for all examples, both graphs and tables, in the book is included in the scripts directory of the package.

## Functions in HH

Name | Description | |

ancova | Compute and plot oneway analysis of covariance | |

AEdotplot | AE (Adverse Events) dotplot of incidence and relative risk | |

NormalAndTplot | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals. | |

OneWayVarPlot | Displays a three-panel bwplot of the data by group, of the group means, and of the entire dataset. This is an approximate visualization of the Mean Square lines from the ANOVA table for a one-way ANOVA model. | |

ResizeEtc | Display multiple independent trellis objects on the same coordinated scale. | |

pdiscunif | Discrete Uniform Distribution | |

intxplot | Interaction plot, with an option to print standard error bars. | |

dchisq.intermediate | Intermediate f and chisq functions to simplify writing for both R and S-Plus. | |

ae.dotplot | AE (Adverse Events) dotplot of incidence and relative risk | |

likertMosaic | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids based on mosaic as the plotting style. | |

HHscriptnames | Find absolute pathname of a script file for the HH book in the HH package. | |

diag.maybe.null | Returns a value for the diagonal of NA and NULL arguments. | |

Discrete4 | Discrete with four levels color dataset. | |

lmplot | Four types of residual plots for linear models. | |

GSremove | Remove selected GraphSheetPages in the S-Plus Windows GUI Graphsheet | |

gof.calculation | Calculate Box--Ljung Goodness of Fit for ARIMA models in S-Plus. | |

as.multicomp | Support functions in R for MMC (mean--mean multiple comparisons) plots. | |

AEdotplot.data.frame | AE (Adverse Events) dotplot of incidence and relative risk, support functions | |

X.residuals | Residuals from the regression of each column of a data.frame against all the other columns. | |

col3x2 | col3x2 color dataset | |

panel.axis.right | Right-justify right-axis tick labels. | |

OddsRatio | Calculate or plot the odds ratio for a 2x2 table of counts. | |

F.curve | plot a chisquare or a F-curve. | |

print.latticeresids | Print a latticeresids object. | |

HH.regsubsets | Display tabular results for Best Subsets Regression. | |

lmatRows | Find the row numbers in the lmat corresponding to the focus factor. | |

if.R | Conditional Execution for R or S-Plus | |

cplx | Generate a sequence spanning the xlim of a lattice window. | |

norm.curve | plot a normal or a t-curve with both x and z axes. | |

mmcPruneIsomeans | MMC plots in lattice---suppress isomeans grid lines for specified levels of the factor. | |

defunct | Defunct Functions in Package 'HH' | |

hovBF | Homogeneity of Variance: Brown--Forsyth method | |

axis.i2wt | specialized axis function for interaction2wt. | |

mmcisomeans | Functions used by mmcplot. | |

panel.dotplot.tb | Dotplot with evenly spaced tiebreakers. | |

mmcplot | MMC (Mean-mean Multiple Comparisons) plots in lattice. | |

partial.corr | partial correlations | |

normalApproxBinomial | Plots to illustrate Normal Approximation to the Binomial---hypothesis tests or confidence intervals. | |

perspPlane | Helper functions for regr2.plot | |

NormalAndTPower | Construct a power graph based on the NTplot. | |

ancova-class | Class "ancova" Analysis of Covariance | |

panel.xysplom | panel method for xysplom. | |

diagQQ | QQ plot of regression residuals. | |

anova.ancovaplot | ANOVA table for a c("ancovaplot","trellis") object. | |

likertColor | Selection of colors for Likert plots. | |

LikertPercentCountColumns | Display likert plots with percents in the first column of panels and counts in the second column of panels. | |

interaction.positioned | interaction method for positioned factors. | |

bivariateNormal | Plot the bivariate normal density using wireframe for specified rho. | |

mmc | MMC (Mean--mean Multiple Comparisons) plots. | |

logit | Logistic and odds functions and their inverses. | |

hhpdf | R tools for writing HH2: hhpdf, hhdev.off, hhcapture, hhcode, hhpng, hhlatex | |

ResizeEtc.likertPlot | Display multiple independent trellis objects, representing likert plots, on the same coordinated scale. | |

strip.background0 | Turn off the coloring in the trellis strip labels. Color 0 is the background color. | |

pyramidLikert | Print a Likert plot as a Population Triangle | |

panel.isomeans | isomeans grid for MMC plots. | |

NTplot | Specify plots to illustrate Normal and t Hypothesis Tests or Confidence Intervals, including normal approximation to the binomial. | |

extra | Miscellaneous functions that I wish were in or consistent between S-Plus and R. | |

lm.case | case statistics for regression analysis | |

multicomp.reverse | Force all comparisons in a "multicomp" object to have the same sign. | |

sufficient | Calculates the mean, standard deviation, and number of observations in each group of a data.frame that has one continuous variable and two factors. | |

regr1.plot | plot x and y, with optional straight line fit and display of squared residuals | |

as.matrix.listOfNamedMatrices | Convert a list of matrices to a single matrix | |

residual.plots.lattice | Construct four sets of regression plots: Y against X, residuals against X, partial residuals against X, partial residuals against each X adjusted for all the other X columns. | |

plot.hov | Homogeneity of Variance Plot | |

xysplom | scatterplot matrix with potentially different sets of variables on the rows and columns. | |

likert | Diverging stacked barcharts for Likert, semantic differential, rating scale data, and population pyramids. | |

ci.plot | Plot confidence and prediction intervals for simple linear regression | |

col.hh | Initializing Trellis Displays | |

glhtWithMCP.993 | Retain averaging behavior that was previously available in glht. | |

arma.loop | Loop through a series of ARIMA models and display coordinated tables and diagnoastic graphs. | |

npar.arma | Count the number of parameters in an ARIMA model specification. | |

print.NormalAndTplot | Print method for Normal and t plots from NTplot. | |

as.vector.trellis | Convert a two-dimensional trellis object into a one-dimensional trellis object. Change the order of panels in a trellis object. | |

panel.bwplot.superpose | Panel function for bwplot that displays an entire box in the colors coded by groups. | |

arima.diag.hh | Repair design error in S-Plus arima.diag | |

as.likert | Support functions for diverging stacked barcharts for Likert, semantic differential, and rating scale data. | |

mmc.mean | MMC (Mean--mean Multiple Comparisons) plots from the sufficient statistics for a one-way design. | |

grid.yaxis.hh | make x- and y-axis labels | |

diagplot5new | Transpose of ECDF for centered fitted values and residuals from a linear model. | |

resid.squares | plot squared residuals in inches to match the y-dimension | |

vif | Calculate the Variance Inflation Factor | |

print.TwoTrellisColumns | Print two conformable trellis plots in adjacent columns with user control of widths. | |

cp.calc | Rearranges and improves the legibility of the output from the stepwise function in S-Plus. | |

seqplot | Time series plot. | |

panel.confintMMC | Confidence interval panel for MMC tiebreaker plots, or confidence interval plot. | |

aovSufficient | Analysis of variance from sufficient statistics for groups. | |

combineLimits.trellisvector | Combine limits on a one-dimensional trellis object. | |

push.vp.hh | push and pop a grid viewport, turn clipping off, change scale. | |

panel.interaction2wt | Plot all main effects and twoway interactions in a multifactor design | |

plot.multicomp | Multiple comparisons plot that gives independent user control over the appearance of the significant and not significant comparisons. | |

mcalinfct | MCA multiple comparisons analysis (pairwise) | |

tsdiagplot | Times series diagnostic plots for a structured set of ARIMA models. | |

do.formula.trellis.xysplom | Interprets model formulas for xysplom and extended bwplots | |

lm.regsubsets | Evaluate lm model with highest adjusted $R^2$. | |

emptyMainLeftAxisLeftStripBottomLegend | Remove main title, left axis tick labels, left strip, bottom legend from plot and keep the vertical spacing allocated to those items. | |

matrix.trellis | Convert a one-dimensional trellis object to a two-dimensional trellis object. This permits combineLimits and useOuterStrips to work. | |

mmcAspect | Control aspect ratio in MMC plots to maintain isomeans grid as a square. | |

anovaMean | ANOVA table from the group sample sizes, means, and standard deviations. | |

residual.plots | Residual plots for a linear model. | |

ladder | Draw a "ladder of powers" plot, plotting each of several powers of y against the same powers of x. | |

datasets | Datasets for Statistical Analysis and Data Display, Heiberger and Holland | |

panel.likert | Panel functions for likert that include a stackWidth argument | |

hov | Homogeneity of Variance | |

plot.mmc.multicomp | MMC (Mean--mean Multiple Comparisons) plot. | |

position | Find or assign the implied position for graphing the levels of a factor. A new class "positioned", which inherits from "ordered" and "factor", is defined. | |

regr2.plot | 3D plot of z against x and y, with regression plane fit and display of squared residuals. | |

lmatPairwise | lmatPairwise | |

tsacfplots | Coordinated time series and ACF and PCF plots. | |

ancovaplot | Analysis of Covariance Plots | |

multicomp.order | Update a multicomp object by ordering its contrasts. | |

strip.xysplom | strip function that is able to place the correlation or regression coefficient into the strip label. | |

print.tsdiagplot | Print a "tsdiagplot" object. | |

export.eps | Exports a graph to an EPS file. | |

panel.bwplott | Extension to S-Plus trellis to allow transposed plots. | |

legendGrob2wt | place separate keys to the left of each row of a trellis | |

panel.bwplot.intermediate.hh | Panel functions for bwplot. | |

panel.acf | Panel functions for tsdiagplot. | |

summary.arma.loop | summary and print and subscript methods for tsdiagplot and related objects. | |

panel.cartesian | trellis panel function, with labeled rows and columns and without strip labels. | |

interaction2wt | Plot all main effects and twoway interactions in a multifactor design | |

panel.pairs.hh | Function based on S-Plus panel.pairs to add the subpanel.scales and panel.cex arguments. | |

objip | loop through all attached directories looking for pattern, possibly restricting to specified class or mode. | |

interval | Prediction and Confidence Intervals for glm Objects | |

hh | Resolve filenames relative to the HH directory. | |

HH-package | Support software for Statistical Analysis and Data Display by Richard M. Heiberger and Burt Holland | |

latticeresids | Subroutine used by residual.plots.lattice | |

positioned-class | Class "positioned", extends "ordered" to specify the position for graphing the levels of a factor. | |

orthog.complete | Construct an orthogonal matrix which is an arbitrary completion of the column space of the input set of columns. | |

panel.ci.plot | Default Panel Function for ci.plot | |

useOuterStripsT2L1 | Three-factor generalization of latticeExtra::useOuterStrips | |

regrresidplot | Draw a plot of y vs x from a linear model object, with residuals indicated by lines or squares. | |

rbind.trellis | Extend matrix reshaping functions to trellis objects. | |

residVSfitted | Draw plots of resid ~ y.hat and sqrt(abs(resid)) ~ y.hat | |

seqplot.forecast | seqplot with confidence bands for the forecast region. | |

No Results! |

## Last month downloads

## Details

Type | Package |

Date | 2016-04-04 |

License | GPL (>= 2) |

NeedsCompilation | no |

Packaged | 2016-04-05 19:09:26 UTC; rmh |

Repository | CRAN |

Date/Publication | 2016-04-06 09:42:54 |

imports | abind , colorspace , grDevices , Hmisc , leaps , methods , RColorBrewer , reshape2 , Rmpfr (>= 0.6.0) , shiny (>= 0.13.1) , vcd |

depends | base (>= 3.0.2) , graphics , grid , gridExtra (>= 2.0.0) , lattice , latticeExtra , multcomp , R (>= 3.0.2) , stats |

suggests | car , mvtnorm , Rcmdr , RcmdrPlugin , RcmdrPlugin.HH , TeachingDemos |

Contributors | Richard Heiberger |

#### Include our badge in your README

```
[![Rdoc](http://www.rdocumentation.org/badges/version/HH)](http://www.rdocumentation.org/packages/HH)
```