HLA_Type_Table


    A data.frame object including HLA-A, B, C, DRB1, DQA1 and DQB1 loci
of 60 samples.


datasets

Genetics

It is a software package for imputing HLA types using SNP data,
and relies on a training set of HLA and SNP genotypes. HIBAG can be used
by researchers with published parameter estimates instead of requiring
access to large training sample datasets. It combines the concepts of
attribute bagging, an ensemble classifier method, with haplotype inference
for SNPs and HLA types. Attribute bagging is a technique which improves
the accuracy and stability of classifier ensembles using bootstrap
aggregating and random variable selection.

Xiuwen Zheng

HIBAG

HLA Genotype Imputation with Attribute Bagging

HLA_Type_Table function

A data.frame object including HLA-A, B, C, DRB1, DQA1 and DQB1 loci
of 60 samples.

HLA_Type_Table: Four-digit HLA types of a study simulated from HapMap CEU

Description

Usage

Arguments

Value

References