plotRD uses HMM output via calc.track to calculate and plot residency distributions for each behavior state and combined data
plotRD(distr, track, ptt, known = NULL, g, xlims, ylims, makePlot = TRUE,
save.plot = FALSE)is output array from hmm.smoother
is output dataframe from calc.track
is individual identification number
is 3 column data frame containing date, lat, lon of known movement track. This is only useful for comparing HMMoce results to known track collected by SPOT or GPS, for example. Default is NULL.
grid from setup.grid
a vector of length 2 indicating longitude limits (-180 to 180).
a vector of length 2 indicating latitude limits
is logical indicating whether to make a plot of the RD
is logical indicating whether you want the plot written to
disk using pdf.
a list of one raster layer for the combined RD and one raster brick (2 layers) for the individual behavior RDs.