sultan


This dataset represents RNA-seq data from humans in two conditions (Ramos B cell line and HEK293T), with two biological replicates per condition.
The ExpressionSet was downloaded from the ReCount online resource.


datasets

This package implements a filtering procedure for
replicated transcriptome sequencing data based on a global
Jaccard similarity index in order to identify genes with low,
constant levels of expression across one or more experimental
conditions.

Andrea Rau

HTSFilter

Filter replicated high-throughput transcriptome sequencing data

sultan function

An ExpressionSet named <code>sultan.eset</code> containing the phenotype data and 
expression data for the Sultan et al. (2008) experiment. Phenotype data may be
accessed using the <code>pData</code> function, and expression data may be accessed
using the <code>exprs</code> function.

Format

ReCount online resource (http://bowtie-bio.sourceforge.net/recount).

sultan: RNA-seq data from humans in Sultan et al. (2008)

Description

Usage

Arguments

Format

Source

References