TP53GenomicFeatures: Demo genomic features around the TP53 gene
Description
Build the genomic features of the TP53 demo region
Usage
TP53GenomicFeatures()
Value
A list of GRanges objects containing the genomic features
Details
Returns a list of genomic features (gene, exons, transcripts) annotating
a region of UCSC hg19 sequence centered on the region of the TP53 gene, with 1 Mb flanking
sequence on each side. This is intended as a test/demonstration to run the NGS pipeline
in conjunction with the LungCancerLines data package.
See Also
TP53Genome, buildGenomicFeaturesFromTxDb, runPipeline