HTSeqGenie (version 4.2.0)

detectQualityInFASTQFile: Detect quality protocol from a FASTQ file

Description

Detect quality protocol from a FASTQ file

Usage

detectQualityInFASTQFile(filename, nreads = 5000)

Arguments

filename

Path to a FASTQ or gzipped-FASTQ file

nreads

Number of reads to test quality on. Default is 5000.

Value

A character vector containing the compatible qualities. NULL if none.