HTSeqGenie (version 4.2.0)

mergeAlignReads: Merge after alignReads

Description

Merge BAMs and create summary alignment file

Usage

mergeAlignReads(indirs, outdir, prepend_str, num_cores)

Arguments

indirs

A character vector, indicating which directories have to be merged

outdir

A character string indicating the output directory (which must exist)

prepend_str

A character string, containing a prefix going to be appended on all output result files

num_cores

Number of cores available for parallel processing (for the merge bam step)

Value

Nothing