reconstruct_sequence

Reconstructs protein sequence from supplied file.

Functions for processing, analysis and visualization of Hydrogen Deuterium eXchange monitored by
Mass Spectrometry experiments (HDX-MS) (<doi:10.1093/bioinformatics/btaa587>). 'HaDeX' introduces a new
standardized and reproducible workflow for the analysis of the HDX-MS data, including novel
uncertainty intervals. Additionally, it covers data exploration, quality control and generation of
publication-quality figures. All functionalities are also available in the in-built 'Shiny' app.

Weronika Puchala

HaDeX

Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass
Spectrometry Data

Michal Burdukiewicz

Dominik Rafacz

reconstruct_sequence function

<dl><dt>dat</dt>
<dd>data read by <code>read_hdx</code></dd>
<dt>protein</dt>
<dd>the protein of which the structure is to be reconstructed</dd></dl>

Arguments

Reconstruct protein sequence — reconstruct_sequence

<dl>

<dt>dat</dt>
<dd>data read by <code>read_hdx</code></dd>


<dt>protein</dt>
<dd>the protein of which the structure is to be reconstructed</dd>

</dl>

reconstruct_sequence: Reconstruct protein sequence

Description

Usage

Value

Arguments

Details

See Also

Examples