ICAMS (version 2.0.7)

Canonicalize1INS: Given an insertion and its sequence context, categorize it.

Description

Given an insertion and its sequence context, categorize it.

Usage

Canonicalize1INS(context, ins.sequence, pos, trace = 0)

Arguments

context

The deleted sequence plus ample surrounding sequence on each side (at least as long as ins.sequence * 6).

ins.sequence

The deleted sequence in context.

pos

The position of ins.sequence in context.

trace

If > 0, then cat information how the computation is carried out.

Value

A string that is the canonical representation of the given insertion type