MakeVCFDBSdf Take DBS ranges and the original VCF and generate a VCF with dinucleotide REF and ALT alleles.
MakeVCFDBSdf(DBS.range.df, SBS.vcf.dt)
A minimal VCF with only the columns CHROM
, POS
,
ID
, REF
, ALT
, VAF
, read.depth
.
Data frame with columns CHROM, LOW, HIGH
A data table containing the VCF from which
DBS.range.df
was computed.