AddSBSClass

Add SBS mutation class to an annotated SBS VCF

internal

ICAMS

AddSBSClass function

<dl><dt>vcf</dt>
<dd>An in-memory VCF file annotated with sequence context and
transcript information by function <code>AnnotateSBSVCF</code>. It must
*not* contain indels and must *not* contain DBS (double base
substitutions), or triplet base substitutions etc., even if encoded as
neighboring SBS.</dd></dl>

Arguments

Add SBS mutation class to an annotated SBS VCF — AddSBSClass

<dl>

<dt>vcf</dt>
<dd>An in-memory VCF file annotated with sequence context and
transcript information by function <code>AnnotateSBSVCF</code>. It must
*not* contain indels and must *not* contain DBS (double base
substitutions), or triplet base substitutions etc., even if encoded as
neighboring SBS.</dd>

</dl>

AddSBSClass: Add SBS mutation class to an annotated SBS VCF

Description

Usage

Value

Arguments