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IFC (version 0.2.1)

FCS_to_data: FCS Object Converter

Description

Converts FCS data object to `IFC_data` object.

Usage

FCS_to_data(fcs, ...)

Value

A named list of class `IFC_data`, whose members are:

-description, a list of descriptive information,

-Merged_fcs, character vector of path of files used to create fcs, if input was a merged,

-Keywords, a named-list of keywords values, only keywords from 1st 'fcs' segment will be retrieved

-fileName, path of fileName input,

-fileName_image, path of .cif image fileName is referring to,

-features, a data.frame of features,

-features_def, a describing how features are defined,

-graphs, a list of graphical elements found,

-pops, a list describing populations found,

-regions, a list describing how regions are defined,

-images, a data.frame describing information about images,

-offsets, an integer vector of images and masks IFDs offsets,

-stats, a data.frame describing populations count and percentage to parent and total population,

-checksum, a checksum integer.

Arguments

fcs

`IFC_fcs` object as extracted by readFCS().

...

other arguments to be passed.

Details

in data can contain extra columns named 'import_file' and 'import_subfile' intended to allow file/dataset identification