get.project.plate.name
IGM.plot.active.wells.network.spikes
plot.active.wells.network.spikes
example 'S' object
remove.spikes
Get WT
IGM.mean.firingrate.by.well
mean.firingrate.by.well
axion.spikestodf
IGM.plot.mean.firingrate.by.well.by.div
plot.mean.firingrate.by.well.by.div
Generic method for plotting network spikes.
axion.spikesum
axion.elec.name.to.xy
Extract well name from electrode name
Calculate inter spike intervals
Calculate average and standard deviation of the bursting features.
get.num.AE
get.file.basename
make.raster
Find bursts
get.array.info
get.data
A utility function to check if network spikes are detected.
IGM.aggregate.feature.data
Aggregate Feature Data
IGM.summary.network.spikes
Generate network spikes based features.
IGM.write.UI.to.log
chem.info.2
Filter wells
IGM.plot.plate.summary.for.bursts
Plot burst features
IGM.plot.plate.summary.for.spikes
plot.plate.summary.for.spikes
Convert network burst data matrix to a list of data frames.
axion.spikesum2
get burst feature information
calculate and plot burst featues distributions
IGM.plot.mean.firingrate.by.eletrode.by.div
plot.mean.firingrate.by.eletrode.by.div
IGM.xyplot.network.spikes
xyplot for network spikes at the plate level.
Compute network bursts for a list of MEA recordings.
Compute the netwrok spikes statistics from spike lists.
isi
Summarize and write netowrk spikes features into a csv file.
Write feature data to an output file
A list of parameters with default values that user can customize.
write.plate.summary.for.spikes
write.plate.summary.for.spikes
Write PDF
write.plate.summary.for.bursts
Prints bursting features
axion.guess.well.number
axion.electrodes.on.well