IMPCdata (version 1.6.0)

getParameters: Method "getParameters"

Description

Returns the list of parameters (IMPReSS IDs) that are measured within specified procedure for a pipeline run by phenotyping center.

Usage

getParameters(PhenCenterName=NULL,PipelineID=NULL,ProcedureID=NULL)

Arguments

PhenCenterName

IMPC phenotyping center; mandatory argument

PipelineID

IMPC pipeline ID; mandatory argument

ProcedureID

IMPC procedure ID; mandatory argument

Value

Returns the list of IMPC parameters (IDS of parameters) that are measured within specified procedure in the pipeline run by phenotyping center.

Examples

    listParameters  <- getParameters("WTSI","MGP_001","IMPC_CBC_001")
    for (parameterIndex in 1:length(listParameters)) {
        print(paste(listParameters[parameterIndex],"-",
                        getName("parameter_stable_id","parameter_name",listParameters[parameterIndex])))
    }