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INSPIRE (version 1.5)

Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets

Description

A method to infer modules of co-expressed genes and the dependencies among the modules from multiple expression datasets that may contain different sets of genes. Please refer to: Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer, Safiye Celik, Benjamin A. Logsdon, Stephanie Battle, Charles W. Drescher, Mara Rendi, R. David Hawkins and Su-In Lee (2016) .

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Version

Install

install.packages('INSPIRE')

Monthly Downloads

27

Version

1.5

License

GPL (>= 2)

Maintainer

Safiye Celik

Last Published

December 9th, 2016

Functions in INSPIRE (1.5)

exmp_dataset2

Example Gene Expression Dataset-2
exmp_dataset1

Example Gene Expression Dataset-1