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IPMbook (version 0.1.5)

Functions and Data for the Book 'Integrated Population Models'

Description

Provides functions and data sets to accompany the book 'Integrated Population Models: Theory and Ecological Applications with R and JAGS' by Michael Schaub and Marc Kéry (ISBN: 9780128205648).

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Version

Install

install.packages('IPMbook')

Monthly Downloads

349

Version

0.1.5

License

GPL (>= 3)

Maintainer

Ken Kellner

Last Published

August 21st, 2023

Functions in IPMbook (0.1.5)

Data for hoopoe from Switzerland, 2002-2017

Data for barn swallows in Switzerland, 1997-2003

Converts dead-recovery capture histories to an m-array

Simulates productivity data

Simulated data for woodchat shrike for use in chapter 5

Simulates a population based on demographic parameters

Simulated data for woodchat shrike for use in chapter 7

Creates age-dependent m-arrays

Simulates detection and count data with spatial and temporal replication

Simulates capture histories from a population

Simulated data for woodchat shrike for use in section 6.3

Data from wrynecks in Switzerland, 2002-2006

Simulates count survey data

Converts capture-histories to an m-array for one age class

Data for peregrine falcons from the Jura Mountains, 1965-2007

Demonstration of a random-walk sampler for a single parameter

Quick and dirty specification of matrices

Data for black grouse from Italy, 1997-2016

Data for red-backed shrike from Germany, 1971-2006

Simulated data for woodchat shrike for use in section 6.4

Simulated data for woodchat shrike for use in section 6.6

Calculates summary statistics from a subset of a population

Helper functions

Various helper functions

Creates an age matrix

Data for greater horseshoe bats from Switzerland, 1989-2017

Convert capture histories in text format to a matrix

Discrete uniform

Discrete uniform prior distribution

Data for gray catbird from New England/Mid-Atlantic region, USA, 1992-2008

Data from three Danish cormorant breeding colonies, 1991-2004

The beta distribution

Data for woodchat shrike from Germany, 1964-1992

IPMbook-package

Functions and data for the book 'Integrated Population Models'

Simulated data for woodchat shrike for use in chapter 10

The gamma distribution

Data on marked white storks in Germany, 1986-2001

Data for black bears in Louisiana, USA, 2007-2012

Data for kestrels from Switzerland, 2002-2016

Data from an elk population in USA, 1988-1993