IdMappingAnalysis (version 1.16.0)

plot.IdMapCounts: Compute and plot the (inversed) ecdf for each ID Map count entry within the IdMapCounts object

Description

Compute and plot the (inversed) ecdf for each ID Map count entry within the IdMapCounts object.

Usage

"plot"(x, idMapNames=NULL, complement=TRUE, log=TRUE, lineColors=NULL, pointSymbols=NULL, pointColors=NULL, cex.main=1.2, cex.lab=1, cex.axis=1, cex.legend=1, par.zoom=1, ...)

Arguments

idMapNames

optional subset of ID Map names within the counts object for which ecdf's should be plotted. If NULL (default), the ecdf's for all ID Maps within the object are plotted.

complement

logical indicating wherether the complementary ecdf should be plotted The default is TRUE

log

logical indicating if log scale should be used. The default is TRUE.

lineColors

Recyclable vector of line colors. If NULL (default), a set of predefined colors is used.

pointSymbols

Character or numeric recyclable vector of symbols used to plotting points. If NULL (default), a set of predefined symbols is used.

pointColors

Recyclable vector of point colors. If NULL (default), a set of predefined colors is used.

cex.main

Font size for plot main title. Default is 1.2.

cex.lab

Font size for X and Y axis titles. Default is 1.

cex.axis

Font sixe for axis labels. Default is 1.

cex.legend

Legend font size. Default is 1.

par.zoom

graphics parameters zoom factor. Scales the graphical parameters like cex, lwd, mai etc.

...

Additional graphical parameters

See Also

For more information see IdMapCounts.

Examples

 jointIdMap<-JointIdMap(examples$identDfList);
 cnts<-jointIdMap$getCounts();
 cnts$plot();