PAscore2

seqname

idx.gp


    an object of <a rd-options="BSgenome" href="/link/BSgenome?package=InPAS&version=1.4.4&to=BSgenome" data-mini-rdoc="BSgenome::BSgenome">BSgenome</a>


genome

classifier

classifier_cutoff

 misc 

Alternative polyadenylation (APA) is one of the important
post-transcriptional regulation mechanisms which occurs in
most human genes. InPAS facilitates the discovery of novel
APA sites from RNAseq data. It leverages cleanUpdTSeq to fine
tune identified APA sites.

Jianhong Ou

InPAS

Identification of Novel alternative PolyAdenylation Sites (PAS)

PAscore2 function


    an object of <a rd-options='BSgenome' href='BSgenome'>BSgenome</a>



 calculate the CP score


PAscore2: calculate the CP score

Description

Usage

Arguments

Value

See Also