InPAS (version 1.4.4)

fisher.exact.test: do fisher exact test for two group datasets

Description

do fisher exact test for two group datasets

Usage

fisher.exact.test(UTR3eset, gp1, gp2)

Arguments

UTR3eset

output of getUTR3eSet

gp1

tag names of group 1

gp2

tag names of group 2

Value

a matrix of test results

See Also

singleSampleAnalyze,singleGroupAnalyze, limmaAnalyze

Examples

    path <- file.path(find.package("InPAS"), "extdata")
    load(file.path(path, "eset.MAQC.rda"))
    tags <- colnames(eset$PDUI.log2)    
    res <- fisher.exact.test(eset, gp1=tags[1:2], gp2=tags[3:4])