get.regions.coverage:
claculate coverage for giving region
Description
claculate coverage for giving region
Usage
get.regions.coverage(chr, utr3.regions.chr, hugeData, coverage, phmm=FALSE)
Arguments
utr3.regions.chr
the GRanges of region to be extracted
hugeData
is it a huge dataset?
coverage
output of coverageFromBedGraph
phmm
prepare data for singleSample analysis?
Value
GRanges with coverage data