lastCDSusage

coverage

hugeData


    An optional <code><a rd-options="BiocParallel" href="/link/BiocParallelParam?package=InPAS&version=1.4.4&to=BiocParallel" data-mini-rdoc="BiocParallel::BiocParallelParam">BiocParallelParam</a></code> 
        instance determining the parallel back-end to be used during 
        evaluation, or a list of BiocParallelParam instances, to be applied 
        in sequence for nested calls to bplapply.


BPPARAM


    prepare data for singleSample analysis?


phmm


    extract coverage of last CDS exon region


 misc 

Alternative polyadenylation (APA) is one of the important
post-transcriptional regulation mechanisms which occurs in
most human genes. InPAS facilitates the discovery of novel
APA sites from RNAseq data. It leverages cleanUpdTSeq to fine
tune identified APA sites.

Jianhong Ou

InPAS

Identification of Novel alternative PolyAdenylation Sites (PAS)

lastCDSusage function


    An optional <code><a rd-options='BiocParallel' href='BiocParallelParam'>BiocParallelParam</a></code> 
        instance determining the parallel back-end to be used during 
        evaluation, or a list of BiocParallelParam instances, to be applied 
        in sequence for nested calls to bplapply.


lastCDSusage: extract coverage of last CDS exon region

Description

Usage

Arguments

Value