polishCPs


    output of <a rd-options="" href="/link/searchProximalCPs?package=InPAS&version=1.4.4" data-mini-rdoc="InPAS::searchProximalCPs">searchProximalCPs</a> or <a rd-options="" href="/link/proximalAdj?package=InPAS&version=1.4.4" data-mini-rdoc="InPAS::proximalAdj">proximalAdj</a>



    remove the multiple positions of CP sites for same 3UTRs and only keep the best
    CP sites for proximal and distal.


 misc 

Alternative polyadenylation (APA) is one of the important
post-transcriptional regulation mechanisms which occurs in
most human genes. InPAS facilitates the discovery of novel
APA sites from RNAseq data. It leverages cleanUpdTSeq to fine
tune identified APA sites.

Jianhong Ou

InPAS

Identification of Novel alternative PolyAdenylation Sites (PAS)

polishCPs function


    output of <a rd-options='' href='searchProximalCPs'>searchProximalCPs</a> or <a rd-options='' href='proximalAdj'>proximalAdj</a>


polishCPs: polish the searching results of CP sites

Description

Usage

Arguments

Value

See Also