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Infusion (version 1.0.0)

Inference Using Simulation

Description

Implements functions for simulation-based inference. In particular, implements functions to perform likelihood inference from data summaries whose distributions are simulated.

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Version

Install

install.packages('Infusion')

Monthly Downloads

4,434

Version

1.0.0

License

CeCILL-2

Maintainer

Franois Rousset

Last Published

July 26th, 2016

Functions in Infusion (1.0.0)

infer_logLs

Infer log Likelihoods using simulated distributions of summary statistics
infer_SLik_joint

Infer as (summary) likelihood surface from simulation table
densv

Saved computations of inferred log-likelihoods
init_grid

Define starting points in parameter space.
Infusion-internal

Internal Infusion Functions
confint.SLik

Compute confidence intervals by (profile) summary likelihood
Infusion

Inference using simulation
handling_NAs

Discrete probability masses and NA/NaN/Inf in distributions of summary statistics.
infer_surface

Infer a (summary) likelihood or tail probability surface from inferred likelihoods
add_simulation

Create or augment a list of simulated distributions of summary statistics
refine

Refine estimates iteratively.
plot1Dprof

Plot likelihood profiles
multi_binning

Multivariate histogram
plot.SLik

Plot SLik or SLikp objects
profile.SLik

Compute profile summary likelihood
MSL

Maximum likelihood from an inferred likelihood surface
project.character

Learn a projection method for statistics and applies it
rparam

Sample the parameter space