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Infusion (version 1.1.0)

Inference Using Simulation

Description

Implements functions for simulation-based inference. In particular, implements functions to perform likelihood inference from data summaries whose distributions are simulated.

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Version

Install

install.packages('Infusion')

Monthly Downloads

824

Version

1.1.0

License

CeCILL-2

Maintainer

Franois Rousset

Last Published

March 24th, 2017

Functions in Infusion (1.1.0)

confint.SLik

Compute confidence intervals by (profile) summary likelihood
densv

Saved computations of inferred log-likelihoods
project.character

Learn a projection method for statistics and applies it
refine

Refine estimates iteratively.
Infusion-internal

Internal Infusion Functions
Infusion

Inference using simulation
init_grid

Define starting points in parameter space.
MSL

Maximum likelihood from an inferred likelihood surface
add_simulation

Create or augment a list of simulated distributions of summary statistics
plot1Dprof

Plot likelihood profiles
profile.SLik

Compute profile summary likelihood
multi_binning

Multivariate histogram
handling_NAs

Discrete probability masses and NA/NaN/Inf in distributions of summary statistics.
infer_SLik_joint

Infer as (summary) likelihood surface from a simulation table
options

Infusion options settings
plot.SLik

Plot SLik or SLikp objects
infer_logLs

Infer log Likelihoods using simulated distributions of summary statistics
infer_surface

Infer a (summary) likelihood or tail probability surface from inferred likelihoods
rparam

Sample the parameter space