IntClust (version 0.1.0)

LabelPlot: Coloring specific leaves of a dendrogram

Description

The function plots a dendrogrmam of which specific leaves are coloured.

Usage

LabelPlot(Data, sel1, sel2 = NULL, col1 = NULL, col2 = NULL)

Arguments

Data

The result of a method which contains the dendrogram to be colored.

sel1

The selection of objects to be colored. Default is NULL.

sel2

An optional second selection to be colored. Default is NULL.

col1

The color for the first selection. Default is NULL.

col2

The color for the optional second selection. Default is NULL.

Value

A plot of the dendrogram of which the leaves of the selection(s) are colored.

Examples

# NOT RUN {
data(fingerprintMat)
MCF7_F = Cluster(fingerprintMat,type="data",distmeasure="tanimoto",normalize=FALSE,
method=NULL,clust="agnes",linkage="flexible",gap=FALSE,maxK=55,StopRange=FALSE)

ClustF_6=cutree(MCF7_F$Clust,6)

SelF=rownames(fingerprintMat)[ClustF_6==6]
SelF

LabelPlot(Data=MCF7_F,sel1=SelF,sel2=NULL,col1='darkorchid')


# }