IntLIM (version 2.0.2)

BuildDataAndLines: A helper function for the PlotPair functions (i.e. the highcharter one and the flat, base-R one).

Description

A helper function for the PlotPair functions (i.e. the highcharter one and the flat, base-R one).

Usage

BuildDataAndLines(
  inputData,
  inputResults,
  outcome,
  independentVariable,
  independentAnalyteOfInterest,
  outcomeAnalyteOfInterest,
  palette = "Set1",
  stype
)

Arguments

inputData

IntLimObject output of ReadData() or FilterData()

inputResults

Data frame with model results (output of ProcessResults())

outcome

'1' or '2' must be set as outcome/independent variable

independentVariable

'1' or '2' must be set as outcome/independent variable

independentAnalyteOfInterest

independent analyte in pair

outcomeAnalyteOfInterest

outcome analyte in pair

palette

choose an RColorBrewer palette ("Set1", "Set2", "Set3", "Pastel1", "Pastel2", "Paired", etc.) or submit a vector of colors

stype

Phenotype or outcome variable