IntLIM (version 2.0.2)

PlotPair: scatter plot of pairs (based on user selection)

Description

scatter plot of pairs (based on user selection)

Usage

PlotPair(
  inputData,
  inputResults,
  outcome,
  independentVariable,
  independentAnalyteOfInterest,
  outcomeAnalyteOfInterest,
  palette = "Set1",
  viewer = TRUE
)

Value

No return value, called for side effects

Arguments

inputData

IntLimObject output of ReadData() or FilterData()

inputResults

Data frame with model results (output of ProcessResults())

outcome

'1' or '2' must be set as outcome/independent variable

independentVariable

'1' or '2' must be set as outcome/independent variable

independentAnalyteOfInterest

independent analyte in pair

outcomeAnalyteOfInterest

outcome analyte in pair

palette

choose an RColorBrewer palette ("Set1", "Set2", "Set3", "Pastel1", "Pastel2", "Paired", etc.) or submit a vector of colors

viewer

whether the plot should be displayed in the RStudio viewer (TRUE) or in Shiny/Knittr (FALSE)