IntLIM (version 2.0.2)

ReadData: Read in CSV file

Description

Read in CSV file

Usage

ReadData(
  inputFile,
  analyteType1id = "id",
  analyteType2id = "id",
  logAnalyteType1 = FALSE,
  logAnalyteType2 = FALSE,
  class.feat = list(),
  suppressWarnings = FALSE
)

Value

IntLimData object with input data

Arguments

inputFile

input file in CSV format (see Despcription)

analyteType1id

name of column from Analyte Type 1 meta data to be used as id (required if an Analyte Type 1 meta data file is present, must match Analyte Type 1 data)

analyteType2id

name of column from Analyte Type 2 meta data to be used as id (required if an Analyte Type 2 meta data file is present, must match Analyte Type 2 data)

logAnalyteType1

whether or not to log values for Analyte Type 1(T/F)

logAnalyteType2

whether or not to log values for Analyte Type 2(T/F)

class.feat

class ("factor" or "numeric") for each covariate. The following format is required: list(covar1="numeric", covar2="factor")

suppressWarnings

whether or not to suppress warnings