sigSegments-class

show,sigSegments-method

Lists the significant segments found in a given sample point matrix using a given significance level

classes

Multi sample aCGH analysis package using kernel
convolution

Jorma de Ronde

KCsmart

Multi sample aCGH analysis package using kernel convolution

sigSegments-class function

Objects can not be created by the user directly but rather through getSigSegments.

Objects from the Class

<dl>
    <dt><code>gains</code>:</dt><dd>Gained segments</dd> <dt><code>losses</code>:</dt><dd>Lost segments</dd> <dt><code>sigma</code>:</dt><dd>The sigma used for the kernel to calculate the sample point matrix.</dd> <dt><code>sigLevels</code>:</dt><dd>The significance levels at which significant segments are calculated</dd> </dl> 

Slots

<dl>
    <dt>show</dt><dd><code>signature(object = "sigSegments")</code>: ... </dd> <dt>write.table</dt><dd><code>signature(x = "sigSegments")</code>: ... </dd> </dl> 

sigSegments-class: Significant segments

Description

Arguments

Objects from the Class

Slots

Methods

Examples