Learn R Programming

KLINK (version 1.1.0)

sibship: Dataset for a full vs half sibship case

Description

A list of two pedigrees forming opposing hypotheses about two individuals NN1 and NN2: FS (full siblings) vs. HS (half siblings). Both individuals are genotyped with the 23 markers included in the Fusion 6C kit. Among the 23 markers, four pairs are linked:

Usage

sibship

Arguments

Format

A list of two ped objects, named FS and HS.

Details

  • TPOX and D2S441 (88.8 cM, 9 & 13 alleles)

  • D5S818 and CSF1PO (27.8 cM, 9 & 11 alleles)

  • vWA and D12S391 (11.9 cM, 12 & 23 alleles)

  • D21S11 and Penta D (44.7 cM, 26 & 24 alleles)

Examples

Run this code
library(pedtools)
plotPedList(sibship, hatched = typedMembers)
markerSummary(sibship)
linkedLR(sibship)

Run the code above in your browser using DataLab