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KMDA (version 1.0)

Kernel-Based Metabolite Differential Analysis

Description

Compute p-values of metabolite differential expression analysis using the kernel-based approach.

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Version

Install

install.packages('KMDA')

Monthly Downloads

9

Version

1.0

License

GNU General Public License

Maintainer

Xiang Zhan

Last Published

April 1st, 2015

Functions in KMDA (1.0)

dkernel

Distance-based Kernel
hcc

Metabolomic Study on Hepatocellular Carcinoma (HCC)
mdist

Metabolite Distance Metric
KMDA-package

Kernel-Based Metabolomic Differential Analysis
tr

Trace of A Matrix
invlogit

Inverse Logit Function
skernel

Stratified Kernel
sscore

Distance-based Kernel Score Test
dscore

Distance-based Kernel Score Test
pearson.group

Grouping Based on Pearson Correlation Coefficients
spearman.group

Grouping Based on Spearman Correlation Coefficients