eval_evidence

This function evaluates the top results by searching for supporting evidence
in the literature for the connections.

A suite of tools for literature-based discovery in biomedical research.
Provides functions for retrieving scientific articles from 'PubMed' and
other NCBI databases, extracting biomedical entities (diseases, drugs, genes, etc.),
building co-occurrence networks, and applying various discovery models
including 'ABC', 'AnC', 'LSI', and 'BITOLA'. The package also includes
visualization tools for exploring discovered connections.

Chao Liu Liu

LBDiscover

Literature-Based Discovery Tools for Biomedical Research

Chao Liu 

eval_evidence function

<dl><dt>results</dt>
<dd>The results to evaluate</dd>
<dt>max_results</dt>
<dd>Maximum number of results to evaluate (default: 5)</dd>
<dt>base_term</dt>
<dd>The base term for direct connection queries (e.g., "migraine")</dd>
<dt>max_articles</dt>
<dd>Maximum number of articles to retrieve per search (default: 5)</dd>
<dt>verbose</dt>
<dd>Logical; if TRUE, print evaluation results (default: TRUE)</dd></dl>

Arguments

Evaluate literature support for discovery results — eval_evidence

<dl>

<dt>results</dt>
<dd>The results to evaluate</dd>


<dt>max_results</dt>
<dd>Maximum number of results to evaluate (default: 5)</dd>


<dt>base_term</dt>
<dd>The base term for direct connection queries (e.g., "migraine")</dd>


<dt>max_articles</dt>
<dd>Maximum number of articles to retrieve per search (default: 5)</dd>


<dt>verbose</dt>
<dd>Logical; if TRUE, print evaluation results (default: TRUE)</dd>

</dl>

eval_evidence: Evaluate literature support for discovery results

Description

Usage

Value

Arguments